Vanilla Bean Cream Cheese Muffins
Tender bakery-style muffins enriched with cream cheese and flecked with real vanilla bean for sophisticated flavor.
My love affair with vanilla beans began during a pastry internship where the chef refused to use anything but real vanilla beans in certain recipes. “Shortcuts have their place,” he’d say, “but never with vanilla.” The first time I split open a vanilla bean pod and scraped out those tiny, fragrant seeds, I understood why. This muffin recipe evolved during my transition from restaurant pastry chef to practical home cook, when I needed to satisfy my craving for bakery-quality treats within the constraints of a busy family schedule.

Vanilla Bean Cream Cheese Muffins
Tender bakery-style muffins enriched with cream cheese and flecked with real vanilla bean for sophisticated flavor.
Prepare Your Equipment
Preheat oven to 350°F (175°C). Line a standard 12-cup muffin tin with paper liners or spray with non-stick cooking spray.
Cream the Butter and Cream Cheese
In a large bowl, beat together the softened cream cheese, butter, and sugar until light and fluffy, about 2-3 minutes. You can use a stand mixer, hand mixer, or vigorously whisk by hand.
Add Eggs and Vanilla
Beat in the eggs one at a time, ensuring each is fully incorporated before adding the next. Add the vanilla bean seeds (or paste) and vanilla extract, and mix well.
Combine Dry Ingredients
In a separate bowl, whisk together the flour, baking powder, baking soda, and salt.
Alternate Wet and Dry
Gradually add the dry ingredients to the cream cheese mixture, alternating with the milk, beginning and ending with the dry ingredients (3 additions of dry, 2 of milk). Mix just until combined after each addition - do not overmix.
Fill the Muffin Cups
Divide the batter evenly among the prepared muffin cups, filling each about 3/4 full. If using, sprinkle the tops with turbinado sugar for a sparkling, slightly crunchy finish.
Bake to Golden Perfection
Bake for 20-25 minutes, until the tops are golden and a toothpick inserted in the center comes out clean or with a few moist crumbs. Start checking at 18 minutes as ovens vary.
Cool and Store
Allow muffins to cool in the pan for 5 minutes, then remove to a wire rack to cool completely. Store in an airtight container at room temperature for up to 3 days, or freeze for up to 3 months.
Must Try Cream Cheese Muffins
Learn how to make these amazing Vanilla Bean Cream Cheese Muffins that are tender, moist and absolutely delicious for breakfast or snacks.
These muffins solve the common breakfast dilemma of balancing nutrition with satisfaction. The protein-rich cream cheese adds staying power while creating an incredibly moist, tender crumb that stays fresh for days. The batter comes together in a single bowl with just a whisk and spatula – no electric mixer required! Make a double batch on Sunday, freeze individually, and microwave for 20 seconds on busy mornings for an instant homemade breakfast that feels genuinely special.
Each golden-domed muffin reveals a velvety interior studded with tiny black vanilla bean flecks – visual evidence of their authentic flavor. The slight tanginess of cream cheese balances the delicate sweetness, while the pure vanilla perfume rises with each warm, tender bite. The tops develop a subtle crust that yields with a gentle crackle to the moist, buttery interior. These aren’t ordinary muffins; they’re the sophisticated cousin of cupcakes, equally at home alongside morning coffee or afternoon tea.

While delicious in their classic form, these versatile muffins welcome thoughtful additions. Fold in fresh berries or chocolate chips, swap the vanilla bean for citrus zest, or top with a simple streusel before baking. For special occasions, drizzle cooled muffins with a quick glaze of powdered sugar mixed with a splash of milk and vanilla extract. Their elegant simplicity and reliable results make these muffins perfect for both everyday breakfasts and weekend brunches where you want something that feels special without requiring special effort.
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